Description : component *(eL40) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G23410 | No alias | Ribosomal protein S27a / Ubiquitin family protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G03240 | UBQ3 | polyubiquitin 3 | 0.02 | OrthoFinder output from all 47 species | |
AT5G37640 | UBQ9 | ubiquitin 9 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g052036 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g08737 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aob_g27421 | RUB1, ATRUB1, NEDD8 | RUB ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.31G024800.1 | UBQ6, Ceric.31G024800 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Gb_40288 | UBQ6 | component RPS27a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g22490.1 | UBQ6, LOC_Os01g22490 | component RPS27a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g39500.1 | LOC_Os09g39500 | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp7g12490.1 | No alias | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Msp_g24177 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g08396 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g02100 | RUB1, ATRUB1, NEDD8 | RUB ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g02418 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05310 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032958 | inositol phosphate biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |