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  5. Aop_g12134

Aop_g12134 (SC35, ATSC35, At-SC35)


Aliases : SC35, ATSC35, At-SC35

Description : not classified & original description: none


Gene families : OG0001818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12134

Target Alias Description ECC score Gene Family Method Actions
AT5G64200 SC35, ATSC35, At-SC35 ortholog of human splicing factor SC35 0.03 OrthoFinder output from all 47 species
Adi_g110137 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08909 SC35, ATSC35, At-SC35 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03500 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25156 SC35, ATSC35, At-SC35 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e024321_P003 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 19 87
No external refs found!