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  5. Aop_g11959

Aop_g11959 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : programmed cell death metacaspase-like regulator *(MCP1) & original description: none


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11959

Target Alias Description ECC score Gene Family Method Actions
Cba_g13227 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000581.22 No alias Metacaspase-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g01382 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.04 OrthoFinder output from all 47 species
GSVIVT01013843001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.03 OrthoFinder output from all 47 species
Lfl_g38364 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
MA_117189g0010 ATMC1, LOL3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g19037 No alias programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Solyc01g088710.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Solyc01g105320.4.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Spa_g04785 ATMC1, LOL3,... programmed cell death metacaSpase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 39 63
No external refs found!