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  5. Aop_g11827

Aop_g11827 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : not classified & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11827

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00012240 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00215p00017850 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s01072p00000950 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s01529p00010210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s02052p00000390 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g26096 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g096000 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Sam_g36104 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g009100.2.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 134 343
No external refs found!