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  5. Aop_g11700

Aop_g11700


Description : chromatin architectural modulator *(DEK) & original description: none


Gene families : OG0001438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11700

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00118220 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G48710 No alias DEK domain-containing chromatin associated protein 0.03 OrthoFinder output from all 47 species
Als_g51377 No alias chromatin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
Cba_g29482 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G057400.1 Ceric.04G057400 chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z004400.1 Ceric.1Z004400 chromatin architectural modulator *(DEK) & original... 0.05 OrthoFinder output from all 47 species
Ceric.20G046000.1 Ceric.20G046000 chromatin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.24 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g513150 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g17466 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Dde_g06454 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g40010.1 LOC_Os03g40010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_105916g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8963515g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g16952 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Smo438416 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g33698 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004959_P001 Zm00001e004959 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR014876 DEK_C 501 554
No external refs found!