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  5. Aop_g11641

Aop_g11641


Description : nucleotidyl transferase component *(TRL) of TRAMP RNA-exosome-regulation complex & original description: none


Gene families : OG0001897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11641

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00123890 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aob_g06675 No alias nucleotidyl transferase component *(TRL) of TRAMP... 0.02 OrthoFinder output from all 47 species
LOC_Os01g48210.1 LOC_Os01g48210 poly(A) RNA polymerase (TRF4) 0.03 OrthoFinder output from all 47 species
Mp3g05650.1 No alias poly(A) RNA polymerase (TRF4) 0.02 OrthoFinder output from all 47 species
Mp6g17640.1 No alias poly(A) RNA polymerase (TRF4) 0.03 OrthoFinder output from all 47 species
Sam_g14917 No alias nucleotidyl transferase component *(TRL) of TRAMP... 0.03 OrthoFinder output from all 47 species
Solyc10g006990.3.1 Solyc10g006990 poly(A) RNA polymerase (TRF4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002058 PAP_assoc 327 385
IPR002934 Polymerase_NTP_transf_dom 156 197
No external refs found!