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  5. Aop_g11580

Aop_g11580 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01529p00010210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aspi01Gene63590.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023711 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=225-2489 0.03 OrthoFinder output from all 47 species
Cba_g77354 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19107 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13865 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_21000 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os09g29660.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g30376 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g16720.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Msp_g15327 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17205 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004489_P001 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 410 615
IPR043926 ABCG_dom 277 332
IPR003439 ABC_transporter-like_ATP-bd 99 248
No external refs found!