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  5. Aop_g11290

Aop_g11290


Description : component *(MPE1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none


Gene families : OG0001168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11290

Target Alias Description ECC score Gene Family Method Actions
Cba_g32528 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Ceric.39G057500.1 Ceric.39G057500 component *(MPE1) of Cleavage and Polyadenylation... 0.05 OrthoFinder output from all 47 species
LOC_Os10g29560.1 LOC_Os10g29560 component MPE1 of Cleavage and Polyadenylation... 0.05 OrthoFinder output from all 47 species
Mp2g17650.1 No alias component MPE1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Ore_g26290 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Ppi_g05925 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Sam_g17748 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Sam_g39118 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 439 454
IPR014891 DWNN_domain 3 76
IPR025829 Zn_knuckle_CX2CX3GHX4C 194 213
No external refs found!