Aop_g11008 (HSP93-V, DCA1,...)

Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : not classified & original description: none

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g11008

Target	Alias	Description	ECC score	Gene Family Method
AT5G15450	CLPB3, CLPB-P, APG6	casein lytic proteinase B3	0.02	OrthoFinder output from all 47 species
AT5G50920	HSP93-V, DCA1,...	CLPC homologue 1	0.02	OrthoFinder output from all 47 species
Adi_g055207	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Als_g49540	CLPB3, CLPB-P, APG6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene23958.t1	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47587.t1	CLPB3, CLPB-P,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61062.t1	ATHSP101, HOT1,...	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene69739.t1	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
GSVIVT01007880001	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
GSVIVT01011496001	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
LOC_Os02g32520.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Len_g02921	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Len_g34142	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
MA_8475g0010	ATHSP101, HOT1, HSP101	Chaperone protein ClpB1 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Mp5g14810.1	SAG15, CLPD, ERD1	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Pir_g31360	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc02g088610.4.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species
Solyc03g117950.3.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Solyc06g082560.3.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.03	OrthoFinder output from all 47 species
Spa_g17937	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g57173	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03515	HSP93-V, DCA1,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e002026_P002	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	477	551
IPR003959	ATPase_AAA_core	631	805
IPR004176	Clp_R_dom	189	237
IPR004176	Clp_R_dom	106	155
IPR003959	ATPase_AAA_core	337	467
IPR019489	Clp_ATPase_C	811	884

External Links

No external refs found!

Aop_g11008 (HSP93-V, DCA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation