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  5. Aop_g10872

Aop_g10872 (ATDRH1, DRH1)


Aliases : ATDRH1, DRH1

Description : not classified & original description: none


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aop_g10872

Target Alias Description ECC score Gene Family Method Actions
Cre01.g021600 ATDRH1, DRH1 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g14109 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08678 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14840 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57013 ATDRH1, DRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020727_P006 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 581 686
IPR011545 DEAD/DEAH_box_helicase_dom 371 541
IPR001202 WW_dom 19 49
No external refs found!