Aop_g10673 (AGL16)

Aliases : AGL16

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g10673
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AT5G51860	No alias	K-box region and MADS-box transcription factor family protein	0.05	OrthoFinder output from all 47 species
LOC_Os02g45770.1	AGL6, LOC_Os02g45770	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Nbi_g30403	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g04915	AGL61, DIA	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g21582	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	196	281
IPR002100	TF_MADSbox	121	168

External Links

No external refs found!