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  5. Aop_g10630

Aop_g10630 (HB-1)


Aliases : HB-1

Description : component *(RINGLET/RLT) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10630

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
AT1G28420 HB-1 homeobox-1 0.03 OrthoFinder output from all 47 species
AT5G44180 No alias Homeodomain-like transcriptional regulator 0.03 OrthoFinder output from all 47 species
Adi_g012033 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ala_g02721 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Als_g14029 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aob_g21500 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Azfi_s0288.g063217 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Azfi_s0575.g078069 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ceric.16G048200.1 HB-1, Ceric.16G048200 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ceric.38G016400.1 Ceric.38G016400 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Cre03.g174500 No alias Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Ehy_g16445 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g30736 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
GSVIVT01020605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01021113001 HB-1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os05g48820.1 LOC_Os05g48820 HOX-like transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g42750.1 LOC_Os07g42750 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Lfl_g10310 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
MA_10432531g0010 No alias Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_2434g0010 No alias HOX-like transcription factor 0.06 OrthoFinder output from all 47 species
Msp_g14817 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Msp_g47810 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ore_g29882 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g25993 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g50552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g077660.3.1 HB-1, Solyc02g077660 HOX-like transcription factor 0.08 OrthoFinder output from all 47 species
Zm00001e020198_P001 HB-1, Zm00001e020198 HOX-like transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e026524_P003 Zm00001e026524 HOX-like transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e028032_P001 Zm00001e028032 HOX-like transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 486 539
IPR028941 WHIM2_dom 1052 1124
IPR028942 WHIM1_dom 883 922
IPR007759 Asxl_HARE-HTH 663 731
No external refs found!