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  5. Aop_g10623

Aop_g10623


Description : not classified & original description: none


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10623

Target Alias Description ECC score Gene Family Method Actions
Als_g06424 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene70952.t1 Aspi01Gene70952 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18516 No alias Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
Gb_27685 KEG Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
Gb_30856 No alias Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Gb_30943 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_34617 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_38713 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g23336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g51224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 1212 1265
IPR011646 KAP_P-loop 1431 1652
IPR011646 KAP_P-loop 1800 1919
No external refs found!