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  5. Aop_g10542

Aop_g10542


Description : subunit alpha of NAC ribosome-associated chaperone complex & original description: none


Gene families : OG0001241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10542
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00135350 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
AT4G10480 No alias Nascent polypeptide-associated complex (NAC), alpha... 0.04 OrthoFinder output from all 47 species
Azfi_s0112.g045795 No alias subunit alpha of NAC ribosome-associated chaperone... 0.02 OrthoFinder output from all 47 species
Cba_g07796 No alias subunit alpha of NAC ribosome-associated chaperone... 0.03 OrthoFinder output from all 47 species
Ceric.26G015900.1 Ceric.26G015900 subunit alpha of NAC ribosome-associated chaperone... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.56 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cre15.g635600 No alias Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Dcu_g32347 NACA3 subunit alpha of NAC ribosome-associated chaperone... 0.03 OrthoFinder output from all 47 species
GSVIVT01025816001 No alias Protein modification.protein folding and quality... 0.06 OrthoFinder output from all 47 species
Gb_29265 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.04 OrthoFinder output from all 47 species
LOC_Os01g71230.1 LOC_Os01g71230 subunit alpha of NAC ribosome-associated chaperone complex 0.03 OrthoFinder output from all 47 species
Lfl_g32404 No alias subunit alpha of NAC ribosome-associated chaperone... 0.04 OrthoFinder output from all 47 species
Mp5g02250.1 No alias subunit alpha of NAC ribosome-associated chaperone complex 0.02 OrthoFinder output from all 47 species
Msp_g35646 No alias subunit alpha of NAC ribosome-associated chaperone... 0.01 OrthoFinder output from all 47 species
Pir_g31812 No alias subunit alpha of NAC ribosome-associated chaperone... 0.02 OrthoFinder output from all 47 species
Pp3c23_15540V3.1 Pp3c23_15540 Nascent polypeptide-associated complex (NAC), alpha... 0.01 OrthoFinder output from all 47 species
Pp3c23_6860V3.1 Pp3c23_6860 Nascent polypeptide-associated complex (NAC), alpha... 0.03 OrthoFinder output from all 47 species
Ppi_g12224 No alias subunit alpha of NAC ribosome-associated chaperone... 0.02 OrthoFinder output from all 47 species
Ppi_g25331 No alias subunit alpha of NAC ribosome-associated chaperone... 0.02 OrthoFinder output from all 47 species
Sam_g24246 No alias subunit alpha of NAC ribosome-associated chaperone... 0.02 OrthoFinder output from all 47 species
Sam_g40595 No alias subunit alpha of NAC ribosome-associated chaperone... 0.05 OrthoFinder output from all 47 species
Sam_g46454 No alias subunit alpha of NAC ribosome-associated chaperone... 0.04 OrthoFinder output from all 47 species
Solyc03g080160.3.1 NACA2, Solyc03g080160 subunit alpha of NAC ribosome-associated chaperone complex 0.06 OrthoFinder output from all 47 species
Solyc10g081030.3.1 Solyc10g081030 subunit alpha of NAC ribosome-associated chaperone complex 0.03 OrthoFinder output from all 47 species
Spa_g12752 No alias subunit alpha of NAC ribosome-associated chaperone... 0.04 OrthoFinder output from all 47 species
Spa_g22142 No alias subunit alpha of NAC ribosome-associated chaperone... 0.03 OrthoFinder output from all 47 species
Spa_g22143 No alias subunit alpha of NAC ribosome-associated chaperone... 0.05 OrthoFinder output from all 47 species
Spa_g38560 No alias subunit alpha of NAC ribosome-associated chaperone... 0.03 OrthoFinder output from all 47 species
Spa_g48181 No alias subunit alpha of NAC ribosome-associated chaperone... 0.04 OrthoFinder output from all 47 species
Tin_g01620 No alias subunit alpha of NAC ribosome-associated chaperone... 0.07 OrthoFinder output from all 47 species
Tin_g05366 No alias subunit alpha of NAC ribosome-associated chaperone... 0.05 OrthoFinder output from all 47 species
Zm00001e001675_P002 Zm00001e001675 subunit alpha of NAC ribosome-associated chaperone complex 0.03 OrthoFinder output from all 47 species
Zm00001e021972_P001 Zm00001e021972 subunit alpha of NAC ribosome-associated chaperone complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044034 NAC-like_UBA 166 204
IPR002715 Nas_poly-pep-assoc_cplx_dom 65 120
No external refs found!