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Description : not classified & original description: none
Gene families : OG0004312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004312_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g10509 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00036430 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02120 | No alias | hydroxyproline-rich glycoprotein family protein | 0.05 | OrthoFinder output from all 47 species | |
| Als_g32387 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aop_g04823 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene26216.t1 | Aspi01Gene26216 | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Cba_g00383 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.27G022500.1 | Ceric.27G022500 | not classified & original description: pacid=50605994... | 0.14 | OrthoFinder output from all 47 species | |
| Dac_g12700 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g16238 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g42889 | No alias | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Dde_g23822 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032906001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Gb_03841 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_25601 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_26295 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Len_g15554 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g22213 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g40624 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| MA_16252g0010 | No alias | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| Mp1g00810.1 | No alias | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| Nbi_g02600 | No alias | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Sam_g08484 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22942 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Solyc02g088830.4.1 | Solyc02g088830 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g30948 | No alias | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g34819 | No alias | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Tin_g32711 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Tin_g41878 | No alias | not classified & original description: none | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |