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Aliases : BARD1, ROW1, ATBARD1
Description : component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination heterodimer & original description: none
Gene families : OG0001776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001776_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g10443 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00180030 | BRCA1, ATBRCA1,... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00092p00067800 | BRCA1, ATBRCA1,... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.09 | OrthoFinder output from all 47 species | |
| AT1G04020 | BARD1, ROW1, ATBARD1 | breast cancer associated RING 1 | 0.11 | OrthoFinder output from all 47 species | |
| AT4G21070 | BRCA1, ATBRCA1 | breast cancer susceptibility1 | 0.06 | OrthoFinder output from all 47 species | |
| Als_g16524 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.15 | OrthoFinder output from all 47 species | |
| Als_g44317 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene06963.t1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene29593.t1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008694 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G016800.1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.16G078600.1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.19G066200.1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.30G011100.1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020537.14 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.04 | OrthoFinder output from all 47 species | |
| Cre07.g334650 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10577 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g15330 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.13 | OrthoFinder output from all 47 species | |
| Dcu_g10242 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Dcu_g42186 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_00493 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os04g43300.1 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os05g43610.1 | BRCA1, ATBRCA1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g03899 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g11293 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
| MA_12220g0020 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.09 | OrthoFinder output from all 47 species | |
| MA_187851g0010 | BRCA1, ATBRCA1 | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.08 | OrthoFinder output from all 47 species | |
| MA_66542g0010 | BRCA1, ATBRCA1 | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.1 | OrthoFinder output from all 47 species | |
| Mp1g00070.1 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g15829 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Nbi_g12141 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.15 | OrthoFinder output from all 47 species | |
| Nbi_g26771 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.11 | OrthoFinder output from all 47 species | |
| Ppi_g16822 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.09 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007705 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008687 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018874 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
| Smo414577 | BARD1, ROW1, ATBARD1 | Protein biosynthesis.translation... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g008210.4.1 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g04261 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g03296 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g32798 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e007590_P001 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e032102_P001 | BRCA1, ATBRCA1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000808 | origin recognition complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0032392 | DNA geometric change | IEP | HCCA |
| BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |