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  5. Aop_g10411

Aop_g10411


Description : pectin acetylesterase *(PAE) & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10411
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Dac_g41074 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08706 No alias pectin acetylesterase *(PAE) & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os01g66850.1 LOC_Os01g66850 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g44070.1 LOC_Os07g44070 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g29610 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03265 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59716 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 OrthoFinder output from all 47 species
Solyc10g038130.3.1 Solyc10g038130 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Spa_g11809 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21771 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007043_P001 Zm00001e007043 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 32 372
No external refs found!