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Aliases : CYCD4;1
Description : regulatory protein *(CYCD) of cell cycle & original description: none
Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g09649 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00148150 | CYCD1;1,... | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| AT1G70210 | CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09917 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g05661 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g15264 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20231 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g20505 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22032 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01667 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12082 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g13442 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03463 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12696 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g31334 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68494 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene22554.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene51365.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54821.t1 | CYCD3, CYCD3;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene72259.t1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g00886 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g00990 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03303 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16891 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g16892 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.07G090200.1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.08G064300.1 | CYCD3;2, Ceric.08G064300 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G017400.1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G003500.1 | CYCD1;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G055700.1 | CYCD3, CYCD3;1,... | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13734 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03868 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g18290 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000125001 | CYCD5;1 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000451001 | CYCD6;1 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003674001 | CYCD6;1 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006022001 | CYCD1;1, ATCYCD1;1 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009432001 | CYCD3;3 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034128001 | CYCD7;1, CYCD7 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34092 | CYCD1;1, ATCYCD1;1 | cyclin (CYCD) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g10650.1 | CYCD5;1, LOC_Os03g10650 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g42070.1 | CYCD5;1, LOC_Os03g42070 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g21450.1 | CYCD1;1,... | cyclin (CYCD) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g00488 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g04581 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12697 | ATCYCD2;1, CYCD2;1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19094 | CYCD4;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20357 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g13622 | ATCYCD2;1, CYCD2;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429174g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429174g0030 | CYCD3, CYCD3;1 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| MA_114375g0010 | CYCD1;1, ATCYCD1;1 | cyclin (CYCD) | 0.04 | OrthoFinder output from all 47 species | |
| MA_559426g0020 | CYCD3;3 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g17230.1 | ATCYCD2;1, CYCD2;1 | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10139 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01101 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g07386 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07526 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g43541 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g47459 | ATCYCD2;1, CYCD2;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g29651 | ATCYCD2;1, CYCD2;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00816 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g04462 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06303 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10385 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g11937 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010523 | ATCYCD2;1, CYCD2;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0134.g022297 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0198.g025534 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06392 | No alias | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14687 | No alias | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo15078 | CYCD3;3 | Cell cycle.regulation.cyclins.CYCD-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g079370.3.1 | CYCD6;1, Solyc02g079370 | cyclin (CYCD) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g092980.3.1 | CYCD3;2, Solyc02g092980 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g006050.3.1 | CYCD1;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04266 | CYCD3, CYCD3;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15040 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15041 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g38227 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g47878 | CYCD1;1, ATCYCD1;1 | regulatory protein *(CYCD) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g46147 | CYCD3;3 | regulatory protein *(CYCD) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009441_P003 | CYCD3, CYCD3;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018000_P001 | CYCD1;1,... | cyclin (CYCD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033498_P001 | CYCD3;3, Zm00001e033498 | cyclin (CYCD) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| No external refs found! |