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  5. Aop_g10290

Aop_g10290


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10290
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
Adi_g111359 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ala_g13947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21468 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g44017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g21770 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os08g38060.1 LOC_Os08g38060 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g06740.1 LOC_Os09g06740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g47682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_78640g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
Ppi_g12414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05316 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e023449_P001 Zm00001e023449 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 6 35
IPR001841 Znf_RING 211 253
No external refs found!