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  5. Aop_g10255

Aop_g10255 (RPN1A, ATRPN1A)


Aliases : RPN1A, ATRPN1A

Description : regulatory component *(RPN1) of 26S proteasome & original description: none


Gene families : OG0003700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g10255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00242820 RPN1A, ATRPN1A,... Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Adi_g022425 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.33G015600.1 RPN1A, ATRPN1A,... regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020703.10 RPN1A, ATRPN1A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020703.9 No alias 26S proteasome non-ATPase regulatory subunit 2 homolog A... 0.05 OrthoFinder output from all 47 species
Cre16.g676197 RPN1B, ATRPN1B Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
Dcu_g06470 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dde_g02349 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Gb_05383 RPN1A, ATRPN1A regulatory component RPN1 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os02g05340.1 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g01899 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp5g07110.1 RPN1A, ATRPN1A regulatory component RPN1 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Smo228162 RPN1A, ATRPN1A Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Spa_g10515 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Spa_g47517 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g49868 RPN1A, ATRPN1A regulatory component *(RPN1) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Zm00001e013651_P001 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e025223_P001 RPN1A, ATRPN1A,... regulatory component RPN1 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041433 RPN1_C 832 885
IPR040892 RPN1_N 47 350
IPR002015 Proteasome/cyclosome_rpt 482 511
No external refs found!