Aop_g09890


Description : splicing factor *(CFM9) & original description: none


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g09890

Target Alias Description ECC score Gene Family Method Actions
Adi_g008013 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61155.t1 Aspi01Gene61155 splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014017 No alias splicing factor *(CFM9) & original description: CDS=265-1956 0.02 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
LOC_Os05g05300.1 LOC_Os05g05300 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
LOC_Os06g20030.1 LOC_Os06g20030 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Mp2g03710.1 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
Pir_g42733 No alias splicing factor *(CFM6/7) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29576 No alias splicing factor *(CFM9) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015065 No alias splicing factor *(CFM9) & original description: CDS=69-1580 0.02 OrthoFinder output from all 47 species
Tin_g27764 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027517_P001 Zm00001e027517 Uncharacterized CRM domain-containing protein At3g25440,... 0.06 OrthoFinder output from all 47 species
Zm00001e040411_P001 Zm00001e040411 Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 202 285
No external refs found!