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  5. Aop_g09870

Aop_g09870


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g09870
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00190300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00040150 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G19090 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
AT3G51290 No alias Protein of unknown function (DUF630) ;Protein of unknown... 0.03 OrthoFinder output from all 47 species
Aev_g39411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g13249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48446 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene04412.t1 Aspi01Gene04412 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22592.t1 Aspi01Gene22592 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062325 No alias not classified & original description: CDS=417-2990 0.03 OrthoFinder output from all 47 species
Cba_g24278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G064300.1 Ceric.03G064300 not classified & original description: pacid=50572356... 0.08 OrthoFinder output from all 47 species
Ceric.08G024600.1 Ceric.08G024600 not classified & original description: pacid=50638274... 0.03 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.05 OrthoFinder output from all 47 species
Ceric.21G041700.1 Ceric.21G041700 not classified & original description: pacid=50603626... 0.05 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.07 OrthoFinder output from all 47 species
Dac_g02345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12389 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01018739001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021596001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023992001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035712001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_04769 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g16640.1 LOC_Os05g16640 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36760.1 LOC_Os09g36760 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g11019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432395g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_13974g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024846 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sam_g16580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo425042 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo425043 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc01g111740.3.1 Solyc01g111740 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc02g083610.4.1 Solyc02g083610 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g054880.3.1 Solyc04g054880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g047830.3.1 Solyc07g047830 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g19034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e021207_P003 Zm00001e021207 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027205_P001 Zm00001e027205 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035963_P001 Zm00001e035963 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e035991_P001 Zm00001e035991 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 254 560
IPR006868 DUF630 1 59
No external refs found!