Aop_g09800


Description : not classified & original description: none


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g09800

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00220910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.03 OrthoFinder output from all 47 species
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G09650 CRM3, HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17616 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g067157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G012400.1 Ceric.01G012400 not classified & original description: pacid=50592360... 0.04 OrthoFinder output from all 47 species
Dde_g09114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os07g31310.1 LOC_Os07g31310 Pentatricopeptide repeat-containing protein At4g17616... 0.04 OrthoFinder output from all 47 species
MA_113202g0010 OTP86 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 OrthoFinder output from all 47 species
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.04 OrthoFinder output from all 47 species
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
Ore_g33799 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015033 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.04 OrthoFinder output from all 47 species
Smo105057 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.04 OrthoFinder output from all 47 species
Smo105853 No alias Pentatricopeptide repeat-containing protein At3g09650,... 0.03 OrthoFinder output from all 47 species
Spa_g32584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e019596_P001 Zm00001e019596 Pentatricopeptide repeat-containing protein At1g69290... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 439 485
IPR002885 Pentatricopeptide_repeat 236 295
IPR002885 Pentatricopeptide_repeat 526 554
No external refs found!