Aop_g09716


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g09716
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Adi_g007230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043186 No alias not classified & original description: CDS=1-3252 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.06 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.05 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.06 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.06 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44526 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G033500.1 Ceric.03G033500 not classified & original description: pacid=50573115... 0.06 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.04 OrthoFinder output from all 47 species
Ceric.14G076500.1 Ceric.14G076500 not classified & original description: pacid=50633826... 0.04 OrthoFinder output from all 47 species
Ceric.15G051000.1 Ceric.15G051000 not classified & original description: pacid=50640878... 0.05 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.04 OrthoFinder output from all 47 species
Ceric.25G039100.1 Ceric.25G039100 not classified & original description: pacid=50593222... 0.07 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.05 OrthoFinder output from all 47 species
Dac_g15098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02319 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06991 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17227 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g23648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30526 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g51244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51784 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22449 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05241 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05980 OTP86 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g07395 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22778 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g27221 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07764 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g09089 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17066 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g19744 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22932 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26775 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g39332 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19941 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g20234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45103 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60441 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31432 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005759 No alias not classified & original description: CDS=1-3063 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009977 No alias not classified & original description: CDS=1-2472 0.04 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14175 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g15863 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g17847 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g25854 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56966 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g24308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 909 965
IPR002885 Pentatricopeptide_repeat 784 831
IPR002885 Pentatricopeptide_repeat 556 603
IPR002885 Pentatricopeptide_repeat 331 377
IPR002885 Pentatricopeptide_repeat 673 719
IPR002885 Pentatricopeptide_repeat 234 276
IPR002885 Pentatricopeptide_repeat 450 479
IPR002885 Pentatricopeptide_repeat 421 447
IPR002885 Pentatricopeptide_repeat 646 671
No external refs found!