Cpa|evm.model.tig00000114.21


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor


Gene families : OG_01_0004195 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000114.21
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00211510 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AT4G26600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.09 Archaeplastida
AT5G55920 OLI2 S-adenosyl-L-methionine-dependent methyltransferases... 0.06 Archaeplastida
Cre06.g273413 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01014717001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
GSVIVT01014718001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Gb_02482 No alias OLI2 LSU processome maturation factor 0.06 Archaeplastida
LOC_Os02g49270.1 No alias OLI2 LSU processome maturation factor 0.06 Archaeplastida
LOC_Os09g37860.1 No alias OLI2 LSU processome maturation factor 0.08 Archaeplastida
MA_10427534g0030 No alias OLI2 LSU processome maturation factor 0.05 Archaeplastida
Mp6g04100.1 No alias OLI2 LSU processome maturation factor 0.18 Archaeplastida
Pp3c1_15210V3.1 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.1 Archaeplastida
Smo437511 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Solyc02g079415.1.1 No alias OLI2 LSU processome maturation factor 0.05 Archaeplastida
Solyc07g052110.4.1 No alias OLI2 LSU processome maturation factor 0.06 Archaeplastida
Zm00001e015692_P001 No alias OLI2 LSU processome maturation factor 0.12 Archaeplastida
Zm00001e023394_P001 No alias OLI2 LSU processome maturation factor 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031341 Methyltr_RsmF_N 311 391
IPR001678 MeTrfase_RsmB/NOP2 395 603
No external refs found!