Aop_g09602 (MCM2, ATMCM2)

Aliases : MCM2, ATMCM2

Description : component *(MCM2) of MCM replicative DNA helicase complex & original description: none

Gene families : OG0004206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004206_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g09602
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00242770	MCM2, ATMCM2,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.12	OrthoFinder output from all 47 species
AT1G44900	MCM2, ATMCM2	minichromosome maintenance (MCM2/3/5) family protein	0.08	OrthoFinder output from all 47 species
Adi_g014964	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Ala_g28049	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.09	OrthoFinder output from all 47 species
Als_g05684	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Als_g06371	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Aspi01Gene05001.t1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.09	OrthoFinder output from all 47 species
Azfi_s0207.g057897	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Ceric.10G002200.1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.15	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.77	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Cre07.g338000	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.08	OrthoFinder output from all 47 species
Dac_g07583	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.13	OrthoFinder output from all 47 species
Dcu_g07094	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Ehy_g18175	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
GSVIVT01001119001	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.16	OrthoFinder output from all 47 species
Gb_10893	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.17	OrthoFinder output from all 47 species
LOC_Os11g29380.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.11	OrthoFinder output from all 47 species
Len_g09187	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.11	OrthoFinder output from all 47 species
Lfl_g39064	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
MA_10431703g0010	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Oryza sativa...	0.14	OrthoFinder output from all 47 species
Mp3g00130.1	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.13	OrthoFinder output from all 47 species
Msp_g13902	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.13	OrthoFinder output from all 47 species
Nbi_g03122	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Ppi_g15758	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023976	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Sam_g04440	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g14285	No alias	component *(MCM2) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Solyc11g040120.3.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.07	OrthoFinder output from all 47 species
Spa_g05361	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Tin_g44536	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.15	OrthoFinder output from all 47 species
Zm00001e021446_P001	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	HCCA
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	HCCA
CC	GO:0005664	nuclear origin of replication recognition complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008156	negative regulation of DNA replication	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	HCCA
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0045005	DNA-templated DNA replication maintenance of fidelity	IEP	HCCA
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0048478	replication fork protection	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:2000104	negative regulation of DNA-templated DNA replication	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033762	MCM_OB	301	428
IPR008045	MCM2	45	175
IPR041562	MCM_lid	726	810
IPR027925	MCM_N	202	295
IPR001208	MCM_dom	469	691

External Links

No external refs found!

Aop_g09602 (MCM2, ATMCM2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation