Aop_g09530 (RABA4D, ATRABA4D)

Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase & original description: none

Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g09530
Cluster	HCCA: Cluster_260

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0155.g053662	ATRABA4C, RABA4C, SMG1	A-class RAB GTPase & original description: CDS=399-1052	0.03	OrthoFinder output from all 47 species
Dde_g04709	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01032054001	ATRABA4C, RABA4C, SMG1	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
LOC_Os10g23100.1	AtRABA4a,...	A-class RAB GTPase	0.07	OrthoFinder output from all 47 species
Len_g12448	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g06105	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.06	OrthoFinder output from all 47 species
Pnu_g22760	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000578	ATRABA4C, RABA4C, SMG1	A-class RAB GTPase & original description: CDS=1-666	0.02	OrthoFinder output from all 47 species
Sam_g08199	No alias	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g010100.2.1	AtRABA4a,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species
Spa_g38230	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g05833	RABA4D, ATRABA4D	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000673_P001	AtRABA4a,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e012878_P002	AtRABA4a,...	A-class RAB GTPase	0.01	OrthoFinder output from all 47 species
Zm00001e038828_P001	AtRABA4a,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	13	173

External Links

No external refs found!

Aop_g09530 (RABA4D, ATRABA4D)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation