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  5. Aop_g08964

Aop_g08964


Description : component *(NDC80) of NDC80 outer kinetochore complex & original description: none


Gene families : OG0005714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005714_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08964
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00050850 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
AT3G54630 No alias CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... 0.1 OrthoFinder output from all 47 species
Ala_g33371 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Als_g05052 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.15 OrthoFinder output from all 47 species
Azfi_s0004.g008544 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.08 OrthoFinder output from all 47 species
Ceric.39G004100.1 Ceric.39G004100 component *(NDC80) of NDC80 outer kinetochore complex &... 0.13 OrthoFinder output from all 47 species
Ceric.39G004200.1 Ceric.39G004200 component *(NDC80) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021621.13 No alias Cell cycle.mitosis and meiosis.chromosome... 0.08 OrthoFinder output from all 47 species
Cre02.g098300 No alias Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
Dcu_g10017 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.2 OrthoFinder output from all 47 species
GSVIVT01023023001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
Gb_08872 No alias component NDC80 of NDC80 outer kinetochore complex 0.11 OrthoFinder output from all 47 species
MA_10432519g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
MA_180359g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species
Mp2g14660.1 No alias component NDC80 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species
Msp_g07559 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.16 OrthoFinder output from all 47 species
Nbi_g11443 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.17 OrthoFinder output from all 47 species
Ppi_g12827 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009856 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.05 OrthoFinder output from all 47 species
Solyc01g104520.3.1 Solyc01g104520 component NDC80 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species
Solyc01g104570.4.1 Solyc01g104570 component NDC80 of NDC80 outer kinetochore complex 0.06 OrthoFinder output from all 47 species
Tin_g04628 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e003996_P001 Zm00001e003996 component NDC80 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 40 161
No external refs found!