Aop_g08952

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g08952
Cluster	HCCA: Cluster_279

Target	Alias	Description	ECC score	Gene Family Method
Len_g18974	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g22557	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10429276g0020	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_109588g0010	No alias	U-box domain-containing protein 62 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012129	No alias	E3 ubiquitin ligase & original description: CDS=296-2575	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	82	146

External Links

No external refs found!