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  5. Lfl_g09502

Lfl_g09502 (PTAC14)


Aliases : PTAC14

Description : cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14) & original description: none


Gene families : OG0004603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09502

Target Alias Description ECC score Gene Family Method Actions
Aop_g08207 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.03 OrthoFinder output from all 47 species
Ceric.04G027900.1 PTAC14, Ceric.04G027900 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 417 476
IPR001214 SET_dom 110 333
No external refs found!