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  5. Aop_g08815

Aop_g08815


Description : component *(CWC22) of MAC spliceosome-associated complex & original description: none


Gene families : OG0004452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08815
Cluster HCCA: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
AT1G80930 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g056632 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Adi_g107297 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ala_g25591 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Aob_g11045 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ceric.1Z119600.1 Ceric.1Z119600 component *(CWC22) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g04879 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Ehy_g09084 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01026760001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g40215 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Mp2g22570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g44880 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Sam_g50425 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Smo145659 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g079920.4.1 Solyc04g079920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g28150 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.07 OrthoFinder output from all 47 species
Zm00001e039666_P001 Zm00001e039666 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 530 711
IPR003891 Initiation_fac_eIF4g_MI 819 924
No external refs found!