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  5. Aop_g08514

Aop_g08514


Description : plant-specific component *(TRIPP) of TRAPP-II Golgi membrane trafficking complex & original description: none


Gene families : OG0006244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08514

Target Alias Description ECC score Gene Family Method Actions
Ceric.39G030300.1 Ceric.39G030300 plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.03 OrthoFinder output from all 47 species
Dcu_g01785 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.05 OrthoFinder output from all 47 species
GSVIVT01036940001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_40358 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05812.1 LOC_Os03g05812 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g40725 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.03 OrthoFinder output from all 47 species
Mp3g24570.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc05g007030.4.1 Solyc05g007030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039644_P001 Zm00001e039644 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!