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  5. Aop_g08311

Aop_g08311


Description : not classified & original description: none


Gene families : OG0012117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08311
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Ala_g05371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.15G026200.1 Ceric.15G026200 not classified & original description: pacid=50639474... 0.05 OrthoFinder output from all 47 species
Dac_g18425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19155 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g43460 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g27053 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03151 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g11395 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g56823 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024372 No alias not classified & original description: CDS=1-2898 0.05 OrthoFinder output from all 47 species
Spa_g28818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 796 840
IPR002885 Pentatricopeptide_repeat 390 420
IPR002885 Pentatricopeptide_repeat 289 318
IPR002885 Pentatricopeptide_repeat 88 115
IPR002885 Pentatricopeptide_repeat 189 218
IPR002885 Pentatricopeptide_repeat 695 724
IPR002885 Pentatricopeptide_repeat 463 484
IPR002885 Pentatricopeptide_repeat 667 690
IPR002885 Pentatricopeptide_repeat 253 283
No external refs found!