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  5. Aop_g08209

Aop_g08209 (PPAN)


Aliases : PPAN

Description : pre-60S ribosomal subunit assembly factor *(SSF1) & original description: none


Gene families : OG0005695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08209

Target Alias Description ECC score Gene Family Method Actions
AT5G61770 PPAN PETER PAN-like protein 0.02 OrthoFinder output from all 47 species
Adi_g059515 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.03 OrthoFinder output from all 47 species
Ceric.32G047900.1 PPAN, Ceric.32G047900 pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Cre10.g450879 PPAN Peter Pan-like protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g01565 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.03 OrthoFinder output from all 47 species
Dcu_g03757 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Ehy_g01174 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028012001 PPAN Peter Pan-like protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g22350.1 PPAN, LOC_Os03g22350 pre-60S ribosomal subunit assembly factor (SSF1) 0.02 OrthoFinder output from all 47 species
Len_g21820 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.03 OrthoFinder output from all 47 species
Mp6g06030.1 PPAN pre-60S ribosomal subunit assembly factor (SSF1) 0.01 OrthoFinder output from all 47 species
Pnu_g08060 PPAN pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species
Sam_g23959 No alias pre-60S ribosomal subunit assembly factor *(SSF1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 36 279
No external refs found!