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  5. Aop_g08189

Aop_g08189


Description : plastidial RNA exonuclease & original description: none


Gene families : OG0006778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08189
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Adi_g047735 No alias plastidial RNA exonuclease & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68831 No alias plastidial RNA exonuclease & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21827 No alias plastidial RNA exonuclease & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18496 No alias plastidial RNA exonuclease & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35691 No alias plastidial RNA exonuclease & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g40575 No alias plastidial RNA exonuclease & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39074 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Smo424829 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR020046 5-3_exonucl_a-hlix_arch_N 98 219
IPR020045 DNA_polI_H3TH 249 334
No external refs found!