Aop_g08140


Description : not classified & original description: none


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08140

Target Alias Description ECC score Gene Family Method Actions
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.03 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013305 No alias not classified & original description: CDS=603-4352 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.07 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g39950.1 LOC_Os10g39950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_123836g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_123836g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4780g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g04466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025686 No alias not classified & original description: CDS=1028-3349 0.03 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!