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  5. Aop_g08052

Aop_g08052


Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08052
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00161170 ATL2, TL2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00040490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G49230 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62690 ATL5 AtL5 0.02 OrthoFinder output from all 47 species
AT4G38140 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.02 OrthoFinder output from all 47 species
Ala_g08587 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g09194 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g34169 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13718 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26269 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00937.t1 BRH1, Aspi01Gene00937 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20771.t1 Aspi01Gene20771 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22449.t1 Aspi01Gene22449 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene37186.t1 Aspi01Gene37186 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene37208.t1 RHA3A, Aspi01Gene37208 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51635.t1 ATRING1, RING1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52668.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65294.t1 Aspi01Gene65294 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65867.t1 RHA3A, Aspi01Gene65867 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70839.t1 Aspi01Gene70839 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0079.g038347 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0098.g043930 No alias not classified & original description: CDS=29-547 0.03 OrthoFinder output from all 47 species
Cba_g26664 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.01G113600.1 ATL5, Ceric.01G113600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.05G094800.1 ATL4H, Ceric.05G094800 not classified & original description: pacid=50578003... 0.03 OrthoFinder output from all 47 species
Ceric.07G057500.1 Ceric.07G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057600.1 Ceric.07G057600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.09G083300.1 Ceric.09G083300 not classified & original description: pacid=50586861... 0.03 OrthoFinder output from all 47 species
Ceric.09G083800.1 Ceric.09G083800 not classified & original description: pacid=50587862... 0.03 OrthoFinder output from all 47 species
Ceric.10G008300.1 Ceric.10G008300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.10G020700.1 RHA2A, Ceric.10G020700 not classified & original description: pacid=50612578... 0.02 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.13G013700.1 RHA3A, Ceric.13G013700 not classified & original description: pacid=50636450... 0.02 OrthoFinder output from all 47 species
Ceric.18G057500.1 Ceric.18G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.18G058800.1 Ceric.18G058800 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.25G037000.1 Ceric.25G037000 not classified & original description: pacid=50594513... 0.03 OrthoFinder output from all 47 species
Ceric.34G017800.1 Ceric.34G017800 not classified & original description: pacid=50623173... 0.02 OrthoFinder output from all 47 species
Dac_g03693 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g31595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07519 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g22738 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g31238 RHA3B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g37746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27968 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012018001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01012019001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01024698001 ATL2, TL2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_14777 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_15836 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_28980 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g11520.1 LOC_Os01g11520 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g60730.2 LOC_Os01g60730 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g15060.1 LOC_Os02g15060 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g15170.1 ATL63, TL63,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g29150.1 ATL8, LOC_Os05g29150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g36310.1 LOC_Os05g36310 RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g06150.1 LOC_Os06g06150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g48680.1 LOC_Os07g48680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g02220.1 LOC_Os12g02220 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g29821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10385 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g27559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_105610g0010 RHA3A no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_129478g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_152783g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_223841g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_308999g0010 ATL2, TL2 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_308999g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_31462g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_31736g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_51630g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_8338g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8362328g0010 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.03 OrthoFinder output from all 47 species
MA_85088g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_932090g0010 ATL6 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp4g04600.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12032 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12499 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20433 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g33332 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g35182 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Msp_g36544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17181 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g27916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28091 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g43484 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g11949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17673 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pp3c23_1651V3.1 Pp3c23_1651 RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g00620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44095 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g25087 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Smo137213 ATL5 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g006910.4.1 Solyc01g006910 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g083660.1.1 Solyc02g083660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g123690.1.1 Solyc03g123690 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc04g007500.1.1 RHA2A, Solyc04g007500 RHA2 signal transducer of abscisic acid perception 0.02 OrthoFinder output from all 47 species
Solyc04g009780.1.1 Solyc04g009780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g010175.1.1 RHA2A, Solyc05g010175 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g018760.3.1 XERICO, Solyc05g018760 ubiquitin protein ligase (XERICO) 0.02 OrthoFinder output from all 47 species
Solyc05g055140.1.1 Solyc05g055140 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc09g075320.1.1 ATL2, TL2, Solyc09g075320 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc10g011880.1.1 Solyc10g011880 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g005320.1.1 Solyc11g005320 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g07427 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g07793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08408 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g10479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g24936 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g29391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38079 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g39301 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g53569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03135 BRH1 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g03901 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g06774 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g20442 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35018 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e007957_P001 ATL6, Zm00001e007957 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014709_P001 Zm00001e014709 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e014764_P001 Zm00001e014764 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e015905_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e019438_P001 Zm00001e019438 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e023585_P001 Zm00001e023585 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e029032_P001 Zm00001e029032 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e032186_P001 RHA3B, Zm00001e032186 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 158
No external refs found!