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  5. Aop_g07986

Aop_g07986


Description : E3 ubiquitin ligase *(LOG2/LUL) & original description: none


Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07986

Target Alias Description ECC score Gene Family Method Actions
Adi_g085388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0388.g067614 No alias not classified & original description: CDS=312-821 0.03 OrthoFinder output from all 47 species
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025674001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ore_g40623 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12834 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09974 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04976 No alias E3 ubiquiTin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038556_P001 Zm00001e038556 Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!