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  5. Aop_g07960

Aop_g07960


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07960

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00159770 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G66870 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g34214 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34490.t1 Aspi01Gene34490 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_14999 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_41331 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g53541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g05719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.02 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g071200.4.1 Solyc02g071200 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g056310.3.1 Solyc07g056310 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014606_P001 Zm00001e014606 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021782_P001 Zm00001e021782 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 103 174
No external refs found!