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  5. Aop_g07059

Aop_g07059


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aop_g07059

Target Alias Description ECC score Gene Family Method Actions
Aev_g07024 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032082001 BB2, BB Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09820.1 LOC_Os02g09820 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g07790.1 BB2, BB, LOC_Os03g07790 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g00887 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g10605 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pnu_g11795 No alias E3 ubiquitin ligase *(EOD1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011847 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g01514 BB2, BB E3 ubiquiTin ligase *(EOD1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000545_P002 BB2, BB, Zm00001e000545 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e038893_P003 BB2, BB, Zm00001e038893 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 235 275
No external refs found!