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  5. Lfl_g09308

Lfl_g09308


Description : component *(ARID5) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0002315 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09308
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Aev_g10249 No alias component *(ARID5) of ISWI chromatin remodeling complex... 0.01 OrthoFinder output from all 39 species
Ceric.01G059600.1 Ceric.01G059600 component *(ARID5) of ISWI chromatin remodeling complex... 0.02 OrthoFinder output from all 39 species
Dcu_g01998 No alias component *(ARID5) of ISWI chromatin remodeling complex... 0.01 OrthoFinder output from all 39 species
Pnu_g23982 No alias component *(ARID5) of ISWI chromatin remodeling complex... 0.01 OrthoFinder output from all 39 species
Smo431374 No alias RNA biosynthesis.transcriptional activation.ARID... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001606 ARID_dom 628 725
No external refs found!