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  5. Aop_g06774

Aop_g06774 (RKP)


Aliases : RKP

Description : E3 ubiquitin ligase *(RKP) & original description: none


Gene families : OG0003375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06774

Target Alias Description ECC score Gene Family Method Actions
AT2G22010 RKP related to KPC1 0.03 OrthoFinder output from all 47 species
Adi_g011552 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13229 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02406 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G032900.1 RKP, Ceric.30G032900 E3 ubiquitin ligase *(RKP) & original description:... 0.05 OrthoFinder output from all 47 species
Cre12.g519150 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dcu_g09317 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_19146 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g05025 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g14830.1 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g08940 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29957 No alias E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g054140.4.1 RKP, Solyc04g054140 E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e035603_P001 RKP, Zm00001e035603 E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR003877 SPRY_dom 150 268
IPR045737 RKP_N 16 139
No external refs found!