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  5. Aop_g06660

Aop_g06660 (CYL2, ATDPB2, DPB2)


Aliases : CYL2, ATDPB2, DPB2

Description : non-catalytic component *(Dpb2) of DNA polymerase epsilon complex & original description: none


Gene families : OG0007445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007445_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06660
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00151000 CYL2, ATDPB2,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder output from all 47 species
AT5G22110 CYL2, ATDPB2, DPB2 DNA polymerase epsilon subunit B2 0.03 OrthoFinder output from all 47 species
Als_g31667 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene71983.t1 CYL2, ATDPB2,... non-catalytic component *(Dpb2) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
Azfi_s0116.g046374 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.06 OrthoFinder output from all 47 species
Ceric.33G019600.1 CYL2, ATDPB2,... non-catalytic component *(Dpb2) of DNA polymerase... 0.17 OrthoFinder output from all 47 species
Cre10.g424200 CYL2, ATDPB2, DPB2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder output from all 47 species
Dcu_g13380 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.14 OrthoFinder output from all 47 species
GSVIVT01008158001 CYL2, ATDPB2, DPB2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.19 OrthoFinder output from all 47 species
LOC_Os05g06840.1 CYL2, ATDPB2,... non-catalytic component Dpb2 of DNA polymerase epsilon complex 0.08 OrthoFinder output from all 47 species
Len_g59791 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.12 OrthoFinder output from all 47 species
MA_34905g0010 CYL2, ATDPB2, DPB2 non-catalytic component Dpb2 of DNA polymerase epsilon complex 0.02 OrthoFinder output from all 47 species
MA_715573g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g11060.1 CYL2, ATDPB2, DPB2 non-catalytic component Dpb2 of DNA polymerase epsilon complex 0.02 OrthoFinder output from all 47 species
Msp_g38493 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.1 OrthoFinder output from all 47 species
Ppi_g11131 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.03 OrthoFinder output from all 47 species
Spa_g12762 CYL2, ATDPB2, DPB2 non-catalytic component *(Dpb2) of DNA polymerase... 0.1 OrthoFinder output from all 47 species
Zm00001e003768_P001 CYL2, ATDPB2,... non-catalytic component Dpb2 of DNA polymerase epsilon complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR024639 DNA_pol_e_bsu_N 10 70
IPR007185 DNA_pol_a/d/e_bsu 279 485
No external refs found!