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  5. Aop_g06607

Aop_g06607


Description : not classified & original description: none


Gene families : OG0011282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06607

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0032.g024791 No alias not classified & original description: CDS=1-1965 0.03 OrthoFinder output from all 47 species
Cba_g01252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G003300.1 Ceric.39G003300 not classified & original description: pacid=50583073... 0.04 OrthoFinder output from all 47 species
Dde_g03902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 337 386
IPR002885 Pentatricopeptide_repeat 197 245
IPR002885 Pentatricopeptide_repeat 267 316
IPR002885 Pentatricopeptide_repeat 408 456
IPR002885 Pentatricopeptide_repeat 160 191
IPR002885 Pentatricopeptide_repeat 513 543
IPR002885 Pentatricopeptide_repeat 483 507
IPR002885 Pentatricopeptide_repeat 623 648
No external refs found!