Lfl_g09262

Description : not classified & original description: none

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g09262

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00126150	RPS5,...	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00062p00146080	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT1G62630	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Aspi01Gene55099.t1	ZAR1, Aspi01Gene55099	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017026001	RPS5	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01017269001	No alias	Probable disease resistance protein At5g63020...	0.02	OrthoFinder output from all 47 species
GSVIVT01038402001	RPS5	Probable disease resistance protein At4g14610...	0.02	OrthoFinder output from all 47 species
LOC_Os03g10900.1	RPS2, LOC_Os03g10900	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_188095g0010	No alias	Probable disease resistance protein At1g61310...	0.02	OrthoFinder output from all 47 species
Msp_g16234	ADR1-L2	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	640	697
IPR002182	NB-ARC	249	458

External Links

No external refs found!