1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g05749

Aop_g05749 (TSK, BRU1, MGO3)


Aliases : TSK, BRU1, MGO3

Description : chromatin stabilizing factor *(TSK) & original description: none


Gene families : OG0009270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05749
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT3G18730 TSK, BRU1, MGO3 tetratricopeptide repeat (TPR)-containing protein 0.05 OrthoFinder output from all 47 species
Azfi_s0090.g042799 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original... 0.05 OrthoFinder output from all 47 species
Ceric.09G039700.1 TSK, BRU1, MGO3,... chromatin stabilizing factor *(TSK) & original... 0.11 OrthoFinder output from all 47 species
GSVIVT01026545001 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.17 OrthoFinder output from all 47 species
Gb_06807 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.03 OrthoFinder output from all 47 species
Len_g59655 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.14 OrthoFinder output from all 47 species
MA_10425879g0010 TSK, BRU1, MGO3 Protein TONSOKU OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
MA_10436754g0010 No alias Protein TONSOKU OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_37605g0010 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.02 OrthoFinder output from all 47 species
Mp6g14510.1 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.07 OrthoFinder output from all 47 species
Nbi_g07608 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015119 TSK, BRU1, MGO3 not classified & original description: CDS=1-582 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024740 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original... 0.02 OrthoFinder output from all 47 species
Smo418913 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.05 OrthoFinder output from all 47 species
Solyc11g005690.3.1 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.12 OrthoFinder output from all 47 species
Tin_g11209 TSK, BRU1, MGO3 chromaTin stabilizing factor *(TSK) & original description: none 0.16 OrthoFinder output from all 47 species
Zm00001e023747_P002 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 257 287
No external refs found!