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  5. Aop_g05618

Aop_g05618


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05618
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Ala_g24081 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26221 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20236.t1 Aspi01Gene20236 E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60335.t1 Aspi01Gene60335 E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G045500.1 Ceric.18G045500 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G056300.1 Ceric.30G056300 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g23333 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39901 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g073900.4.1 Solyc01g073900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g109340.4.1 Solyc01g109340 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g17089 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27246 No alias E3 ubiquiTin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30114 No alias E3 ubiquiTin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005157_P001 Zm00001e005157 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 31 73
No external refs found!