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  3. Amblovenatum opulentum
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  5. Aop_g05556

Aop_g05556


Description : not classified & original description: none


Gene families : OG0006545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05556

Target Alias Description ECC score Gene Family Method Actions
AT3G23020 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g014933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G000500.1 Ceric.27G000500 not classified & original description: pacid=50606226... 0.08 OrthoFinder output from all 47 species
Dac_g22039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09918 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g12772 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g30252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo77736 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.04 OrthoFinder output from all 47 species
Solyc07g054480.3.1 Solyc07g054480 Pentatricopeptide repeat-containing protein At1g73710... 0.03 OrthoFinder output from all 47 species
Solyc09g083110.3.1 Solyc09g083110 Pentatricopeptide repeat-containing protein At3g23020... 0.04 OrthoFinder output from all 47 species
Tin_g09786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 638 664
IPR002885 Pentatricopeptide_repeat 430 448
IPR002885 Pentatricopeptide_repeat 356 386
IPR002885 Pentatricopeptide_repeat 531 556
IPR002885 Pentatricopeptide_repeat 283 327
IPR002885 Pentatricopeptide_repeat 808 851
IPR002885 Pentatricopeptide_repeat 703 743
IPR002885 Pentatricopeptide_repeat 169 214
IPR002885 Pentatricopeptide_repeat 457 502
IPR002885 Pentatricopeptide_repeat 562 611
IPR002885 Pentatricopeptide_repeat 250 276
No external refs found!