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  5. Lfl_g09168

Lfl_g09168


Description : not classified & original description: none


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09168

Target Alias Description ECC score Gene Family Method Actions
AT2G28400 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
Adi_g008525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14014.t1 Aspi01Gene14014 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40683.t1 Aspi01Gene40683 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40684.t1 Aspi01Gene40684 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51681.t1 Aspi01Gene51681 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62379.t1 Aspi01Gene62379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0705.g082674 No alias not classified & original description: CDS=1-897 0.03 OrthoFinder output from all 47 species
Cba_g03651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012731001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025684001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g33760.1 LOC_Os04g33760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g33990.1 LOC_Os10g33990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434437g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_359496g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023580 No alias not classified & original description: CDS=1-843 0.03 OrthoFinder output from all 47 species
Sam_g12566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo95729 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g064650.3.1 Solyc07g064650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g007790.1.1 Solyc09g007790 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e015167_P001 Zm00001e015167 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 163 347
No external refs found!