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  5. Aop_g05484

Aop_g05484


Description : not classified & original description: none


Gene families : OG0015776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015776_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05484
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Azfi_s2106.g109319 No alias not classified & original description: CDS=1-327 0.03 OrthoFinder output from all 47 species
Ppi_g57084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 15 45
IPR002885 Pentatricopeptide_repeat 223 247
IPR002885 Pentatricopeptide_repeat 121 148
IPR002885 Pentatricopeptide_repeat 47 95
IPR002885 Pentatricopeptide_repeat 149 196
IPR046848 E_motif 266 328
No external refs found!